Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv19A0A0B4J1H4 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv19A0A0B4J1H4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv19A0A0B4J1H4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv19A0A0B4J1H4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv19A0A0B4J1H4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.45■□□□□ 0.22
Trbv19A0A0B4J1H4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm5921-201ENSMUST00000075898 882 ntBASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm13238-201ENSMUST00000117655 780 ntBASIC16.43■□□□□ 0.22
Trbv19A0A0B4J1H4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv19A0A0B4J1H4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv19A0A0B4J1H4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv19A0A0B4J1H4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trbv19A0A0B4J1H4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv19A0A0B4J1H4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Gm43566-201ENSMUST00000196851 808 ntBASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv19A0A0B4J1H4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv19A0A0B4J1H4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms