Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv12-1A0A0B4J1H0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv12-1A0A0B4J1H0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.21■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv12-1A0A0B4J1H0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.2■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv12-1A0A0B4J1H0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.18■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.18■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv12-1A0A0B4J1H0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms