Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav18A0A075B656 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.8■□□□□ 0.28
Trav18A0A075B656 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trav18A0A075B656 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav18A0A075B656 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trav18A0A075B656 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav18A0A075B656 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav18A0A075B656 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav18A0A075B656 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav18A0A075B656 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav18A0A075B656 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav18A0A075B656 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav18A0A075B656 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav18A0A075B656 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav18A0A075B656 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav18A0A075B656 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav18A0A075B656 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav18A0A075B656 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.75■□□□□ 0.27
Trav18A0A075B656 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.75■□□□□ 0.27
Trav18A0A075B656 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.74■□□□□ 0.27
Trav18A0A075B656 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.74■□□□□ 0.27
Trav18A0A075B656 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.74■□□□□ 0.27
Trav18A0A075B656 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav18A0A075B656 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav18A0A075B656 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms