Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Golph3-205ENSMUST00000228671 2842 ntBASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav12-3A0A075B648 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav12-3A0A075B648 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav12-3A0A075B648 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav12-3A0A075B648 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav12-3A0A075B648 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav12-3A0A075B648 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav12-3A0A075B648 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav12-3A0A075B648 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav12-3A0A075B648 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms