Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.52■□□□□ 0.08
Trav14n-3A0A075B645 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav14n-3A0A075B645 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.52■□□□□ 0.07
Trav14n-3A0A075B645 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav14n-3A0A075B645 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Trav14n-3A0A075B645 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav14n-3A0A075B645 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav14n-3A0A075B645 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav14n-3A0A075B645 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Gm6821-201ENSMUST00000107540 542 ntBASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav14n-3A0A075B645 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav14n-3A0A075B645 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav14n-3A0A075B645 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav14n-3A0A075B645 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav14n-3A0A075B645 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav14n-3A0A075B645 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav14n-3A0A075B645 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms