Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav16nA0A075B634 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav16nA0A075B634 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16nA0A075B634 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16nA0A075B634 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16nA0A075B634 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16nA0A075B634 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trav16nA0A075B634 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16nA0A075B634 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav16nA0A075B634 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav16nA0A075B634 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav16nA0A075B634 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav16nA0A075B634 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav16nA0A075B634 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav16nA0A075B634 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Gm9806-201ENSMUST00000051080 552 ntBASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav16nA0A075B634 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Scarna2-201ENSMUST00000157560 414 ntBASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav16nA0A075B634 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Gm16437-201ENSMUST00000025669 507 ntBASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav16nA0A075B634 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms