Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4d-3A0A075B625 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Gm9812-201ENSMUST00000061934 968 ntBASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4d-3A0A075B625 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav4d-3A0A075B625 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4d-3A0A075B625 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4d-3A0A075B625 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav4d-3A0A075B625 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav4d-3A0A075B625 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.96□□□□□ -0.18
Trav4d-3A0A075B625 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Gm43545-201ENSMUST00000196765 2779 ntBASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav4d-3A0A075B625 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4d-3A0A075B625 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Nkain2-201ENSMUST00000092602 558 ntBASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4d-3A0A075B625 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4d-3A0A075B625 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4d-3A0A075B625 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4d-3A0A075B625 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4d-3A0A075B625 AC122317.2-201ENSMUST00000218708 1248 ntBASIC13.92□□□□□ -0.18
Trav4d-3A0A075B625 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav4d-3A0A075B625 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav4d-3A0A075B625 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4d-3A0A075B625 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Tdp2-203ENSMUST00000223804 1136 ntBASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Terc-201ENSMUST00000082862 423 ntBASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4d-3A0A075B625 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav4d-3A0A075B625 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav4d-3A0A075B625 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4d-3A0A075B625 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 153.4 ms