Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-6A0A075B603 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-6A0A075B603 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-6A0A075B603 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-6A0A075B603 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-6A0A075B603 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav6-6A0A075B603 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6-6A0A075B603 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6-6A0A075B603 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6-6A0A075B603 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6-6A0A075B603 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms