Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
H2afb3S4R1G7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.63□□□□□ -0.71
H2afb3S4R1G7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm9230-201ENSMUST00000188228 532 ntBASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm9136-201ENSMUST00000193368 454 ntBASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
H2afb3S4R1G7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gm13297-201ENSMUST00000120205 934 ntBASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.62□□□□□ -0.71
H2afb3S4R1G7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms