Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm32999-201ENSMUST00000192693 562 ntBASIC11.47□□□□□ -0.57
Cdh17Q9R100 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh17Q9R100 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.47□□□□□ -0.57
Cdh17Q9R100 Cts7-204ENSMUST00000225321 1257 ntBASIC11.47□□□□□ -0.57
Cdh17Q9R100 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.47□□□□□ -0.57
Cdh17Q9R100 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh17Q9R100 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.46□□□□□ -0.57
Cdh17Q9R100 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.46□□□□□ -0.57
Cdh17Q9R100 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.46□□□□□ -0.57
Cdh17Q9R100 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm5705-201ENSMUST00000066241 711 ntBASIC11.46□□□□□ -0.57
Cdh17Q9R100 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cdh17Q9R100 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.46□□□□□ -0.58
Cdh17Q9R100 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.46□□□□□ -0.58
Cdh17Q9R100 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Cdh17Q9R100 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.45□□□□□ -0.58
Cdh17Q9R100 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.45□□□□□ -0.58
Cdh17Q9R100 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.45□□□□□ -0.58
Cdh17Q9R100 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.45□□□□□ -0.58
Cdh17Q9R100 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm11660-201ENSMUST00000120955 412 ntBASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Cdh17Q9R100 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms