Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Gm13809-201ENSMUST00000117921 597 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm13263-201ENSMUST00000121271 838 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Phtf1Q9QZ09 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm13916-201ENSMUST00000117368 628 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm8731-201ENSMUST00000118088 412 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm1821-202ENSMUST00000227415 750 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Phtf1Q9QZ09 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Gm11783-201ENSMUST00000119549 885 ntBASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Spcs1-203ENSMUST00000226374 592 ntBASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Ntng1-201ENSMUST00000051253 327 ntBASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Phtf1Q9QZ09 Ginm1-202ENSMUST00000065124 300 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms