Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm23255-201ENSMUST00000102244 110 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm12663-201ENSMUST00000118481 958 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm9673-201ENSMUST00000119287 781 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm9081-201ENSMUST00000182346 991 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm6644-201ENSMUST00000186507 951 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm45113-201ENSMUST00000207518 165 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm30671-201ENSMUST00000214898 318 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 AC164087.2-201ENSMUST00000216206 1072 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm10263-201ENSMUST00000085163 300 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm14234-201ENSMUST00000119539 845 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm15610-201ENSMUST00000120584 195 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm26047-201ENSMUST00000157308 113 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm25226-201ENSMUST00000158198 123 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm18776-201ENSMUST00000188833 654 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm17796-201ENSMUST00000189015 1213 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm42430-201ENSMUST00000197209 616 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm26047-202ENSMUST00000198840 115 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm45085-201ENSMUST00000209100 441 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm45481-201ENSMUST00000209717 877 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Crlf1Q9JM58 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms