Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC156802.2-203ENSMUST00000226032 1906 ntBASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Gm9271-201ENSMUST00000185988 2580 ntBASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trem1Q9JKE2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Gm15321-201ENSMUST00000121290 288 ntBASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Itm2b-204ENSMUST00000228637 783 ntBASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Gm38001-201ENSMUST00000192900 3761 ntBASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trem1Q9JKE2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trem1Q9JKE2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm22189-201ENSMUST00000103822 86 ntBASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm5354-201ENSMUST00000182417 973 ntBASIC10.52□□□□□ -0.73
Trem1Q9JKE2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.52□□□□□ -0.73
Trem1Q9JKE2 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm13140-201ENSMUST00000119840 3151 ntBASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trem1Q9JKE2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms