Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Timp4Q9JHB3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm25076-201ENSMUST00000104098 132 ntBASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm20495-201ENSMUST00000173902 235 ntBASIC12.19□□□□□ -0.46
Timp4Q9JHB3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm8342-201ENSMUST00000209839 757 ntBASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Gm4978-201ENSMUST00000071565 801 ntBASIC12.19□□□□□ -0.46
Timp4Q9JHB3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Timp4Q9JHB3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Gm13888-201ENSMUST00000119148 422 ntBASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Gm11246-201ENSMUST00000120880 345 ntBASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Gm9645-201ENSMUST00000197131 792 ntBASIC12.18□□□□□ -0.46
Timp4Q9JHB3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.18□□□□□ -0.46
Timp4Q9JHB3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Timp4Q9JHB3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms