Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hmgn3Q9DCB1 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm11803-201ENSMUST00000119966 444 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm15610-201ENSMUST00000120584 195 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm6114-201ENSMUST00000182472 968 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm37497-201ENSMUST00000195830 798 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm17931-201ENSMUST00000208132 634 ntBASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmgn3Q9DCB1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.04□□□□□ -0.64
Hmgn3Q9DCB1 Gm8810-201ENSMUST00000172895 754 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms