Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Chmp4cQ9D7F7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm11989-201ENSMUST00000117240 672 ntBASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm11362-201ENSMUST00000118838 850 ntBASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm15547-201ENSMUST00000122152 333 ntBASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm5070-201ENSMUST00000177599 862 ntBASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm45865-201ENSMUST00000211815 945 ntBASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp4cQ9D7F7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Chmp4cQ9D7F7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Gm12036-201ENSMUST00000120008 530 ntBASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp4cQ9D7F7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms