Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Rprl1-201ENSMUST00000158050 327 ntBASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm40466-201ENSMUST00000212174 422 ntBASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm5035-201ENSMUST00000215581 927 ntBASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chaf1bQ9D0N7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chaf1bQ9D0N7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms