Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Gm13570-201ENSMUST00000140763 309 ntBASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Gm6244-201ENSMUST00000178732 841 ntBASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ddx47Q9CWX9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Gm11478-201ENSMUST00000117851 599 ntBASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Ddx47Q9CWX9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ddx47Q9CWX9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ddx47Q9CWX9 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.08□□□□□ -0.47
Ddx47Q9CWX9 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Gm12164-201ENSMUST00000121695 551 ntBASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Gm11960-201ENSMUST00000122068 925 ntBASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.08□□□□□ -0.48
Ddx47Q9CWX9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms