Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
RTRAFQ9CQE8 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm13123-201ENSMUST00000122173 492 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm2231-201ENSMUST00000125661 612 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Mir7654-201ENSMUST00000185082 70 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm28631-201ENSMUST00000190740 334 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm37922-201ENSMUST00000195596 455 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.55□□□□□ -0.88
RTRAFQ9CQE8 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm24830-201ENSMUST00000102024 166 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm13492-201ENSMUST00000119772 665 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm38671-201ENSMUST00000200573 130 ntBASIC9.54□□□□□ -0.88
RTRAFQ9CQE8 Gm44958-201ENSMUST00000203734 736 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms