Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.44□□□□□ -0.26
Trim11Q99PQ2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Gm11960-201ENSMUST00000122068 925 ntBASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.44□□□□□ -0.26
Trim11Q99PQ2 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.44□□□□□ -0.26
Trim11Q99PQ2 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm14723-201ENSMUST00000118686 215 ntBASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm13665-201ENSMUST00000120830 528 ntBASIC13.43□□□□□ -0.26
Trim11Q99PQ2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm9899-201ENSMUST00000065519 555 ntBASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm5705-201ENSMUST00000066241 711 ntBASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim11Q99PQ2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm22133-201ENSMUST00000102082 109 ntBASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm6754-201ENSMUST00000117124 913 ntBASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm38314-201ENSMUST00000195709 625 ntBASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm2553-201ENSMUST00000215986 605 ntBASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim11Q99PQ2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim11Q99PQ2 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms