Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm16379-201ENSMUST00000161469 348 ntBASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm2546-201ENSMUST00000182630 991 ntBASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm8762-201ENSMUST00000193486 339 ntBASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm42627-201ENSMUST00000197347 224 ntBASIC11.58□□□□□ -0.56
Trim8Q99PJ2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm14832-201ENSMUST00000121289 322 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm12164-201ENSMUST00000121695 551 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm38158-201ENSMUST00000194617 339 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim8Q99PJ2 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms