Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b1Q99NB9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b1Q99NB9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Gm43186-201ENSMUST00000198130 824 ntBASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Gm6108-201ENSMUST00000208365 367 ntBASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b1Q99NB9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm11949-201ENSMUST00000117640 372 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm12036-201ENSMUST00000120008 530 ntBASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.51□□□□□ -0.41
Sf3b1Q99NB9 Gm23771-201ENSMUST00000178702 110 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms