Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm43163-201ENSMUST00000196571 442 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm25053-202ENSMUST00000199731 132 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Gm18968-201ENSMUST00000221319 862 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.46□□□□□ -0.41
Clp1Q99LI9 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clp1Q99LI9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clp1Q99LI9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Clp1Q99LI9 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Clp1Q99LI9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm12247-201ENSMUST00000117585 670 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm14441-201ENSMUST00000121960 540 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm25554-201ENSMUST00000158075 113 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm43380-201ENSMUST00000200421 220 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm18204-201ENSMUST00000209835 793 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm39288-201ENSMUST00000210554 446 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm45500-201ENSMUST00000211676 803 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clp1Q99LI9 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.45□□□□□ -0.42
Clp1Q99LI9 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm24791-201ENSMUST00000104284 131 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm11560-201ENSMUST00000117567 948 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm13351-201ENSMUST00000118087 414 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm15036-201ENSMUST00000118880 400 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm22379-201ENSMUST00000157480 131 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm8451-201ENSMUST00000170338 447 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm8197-202ENSMUST00000193422 934 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm7536-201ENSMUST00000077389 444 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm5453-201ENSMUST00000080866 447 ntBASIC12.44□□□□□ -0.42
Clp1Q99LI9 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.44□□□□□ -0.42
Clp1Q99LI9 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms