Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gzmn-202ENSMUST00000225535 989 ntBASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm9899-201ENSMUST00000065519 555 ntBASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cstf3Q99LI7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm11511-201ENSMUST00000118146 540 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm27516-201ENSMUST00000184237 98 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm38266-201ENSMUST00000194931 421 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm8956-201ENSMUST00000203939 825 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Cts7-204ENSMUST00000225321 1257 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cstf3Q99LI7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.4□□□□□ -0.58
Cstf3Q99LI7 Rprl1-202ENSMUST00000198476 238 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms