Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb1Q91Y08 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb1Q91Y08 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb1Q91Y08 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm23949-201ENSMUST00000104027 127 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm28937-201ENSMUST00000185413 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm29400-201ENSMUST00000187208 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm28662-201ENSMUST00000188446 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm28251-201ENSMUST00000188835 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm37318-201ENSMUST00000194325 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm38017-201ENSMUST00000194768 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm37287-201ENSMUST00000195449 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm37793-201ENSMUST00000195548 695 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Rps4l-202ENSMUST00000204242 789 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb1Q91Y08 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb1Q91Y08 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb1Q91Y08 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms