Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm11956-201ENSMUST00000119525 512 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm25201-201ENSMUST00000083093 170 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga6Q91XY2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm25545-201ENSMUST00000122673 323 ntBASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm17877-201ENSMUST00000192578 814 ntBASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm9645-201ENSMUST00000197131 792 ntBASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm44980-201ENSMUST00000205826 314 ntBASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga6Q91XY2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga6Q91XY2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms