Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm13035-201ENSMUST00000117496 342 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm11980-201ENSMUST00000121445 986 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 B9d1os-201ENSMUST00000137010 674 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm5733-201ENSMUST00000190232 939 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm37576-201ENSMUST00000194228 372 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm19287-201ENSMUST00000203190 358 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.31□□□□□ -0.44
Usp3Q91W36 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Usp3Q91W36 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp3Q91W36 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm20541-201ENSMUST00000173035 1406 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm9506-201ENSMUST00000118516 320 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm12566-201ENSMUST00000121479 359 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm14441-201ENSMUST00000121960 540 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.3□□□□□ -0.44
Usp3Q91W36 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm8100-201ENSMUST00000182906 988 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Gm2965-201ENSMUST00000198365 343 ntBASIC12.3□□□□□ -0.44
Usp3Q91W36 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Usp3Q91W36 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.3□□□□□ -0.44
Usp3Q91W36 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Usp3Q91W36 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms