Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm12957-201ENSMUST00000117835 377 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Gm17420-201ENSMUST00000164753 153 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Gm27572-201ENSMUST00000183702 255 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 AY702102-202ENSMUST00000194651 1173 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Morn2-202ENSMUST00000227729 656 ntBASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
H2afjQ8R1M2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
H2afjQ8R1M2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm23931-201ENSMUST00000103842 109 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm8062-201ENSMUST00000139696 444 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm38158-201ENSMUST00000194617 339 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm9996-201ENSMUST00000070359 913 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.95□□□□□ -0.66
H2afjQ8R1M2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
H2afjQ8R1M2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.94□□□□□ -0.66
H2afjQ8R1M2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Gm15370-201ENSMUST00000117158 253 ntBASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Gm12036-201ENSMUST00000120008 530 ntBASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Gm11793-201ENSMUST00000120433 981 ntBASIC10.94□□□□□ -0.66
H2afjQ8R1M2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms