Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm7488-201ENSMUST00000117148 684 ntBASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm6439-201ENSMUST00000199849 862 ntBASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.71□□□□□ -0.69
Ebf4Q8K4J2 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ebf4Q8K4J2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm24934-201ENSMUST00000103764 111 ntBASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm13736-201ENSMUST00000119272 253 ntBASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Gm7029-201ENSMUST00000173226 450 ntBASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ebf4Q8K4J2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms