Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clrn1Q8K445 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Clrn1Q8K445 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Mir7677-201ENSMUST00000184226 67 ntBASIC11.12□□□□□ -0.63
Clrn1Q8K445 Gm37666-201ENSMUST00000194110 866 ntBASIC11.12□□□□□ -0.63
Clrn1Q8K445 Gm2553-201ENSMUST00000215986 605 ntBASIC11.12□□□□□ -0.63
Clrn1Q8K445 Gm9257-201ENSMUST00000221254 232 ntBASIC11.12□□□□□ -0.63
Clrn1Q8K445 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.12□□□□□ -0.63
Clrn1Q8K445 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.12□□□□□ -0.63
Clrn1Q8K445 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Clrn1Q8K445 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm23949-201ENSMUST00000104027 127 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm12380-201ENSMUST00000119012 544 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm2383-201ENSMUST00000181461 807 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm8343-201ENSMUST00000182705 994 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm28686-201ENSMUST00000187404 609 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm18038-201ENSMUST00000197900 485 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm18212-201ENSMUST00000211678 889 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Gm26448-201ENSMUST00000082446 203 ntBASIC11.11□□□□□ -0.63
Clrn1Q8K445 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.11□□□□□ -0.63
Clrn1Q8K445 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms