Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Gm5705-201ENSMUST00000066241 711 ntBASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cchcr1Q8K2I2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cchcr1Q8K2I2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Gm13296-201ENSMUST00000117854 997 ntBASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Gm11439-201ENSMUST00000118598 409 ntBASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cchcr1Q8K2I2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms