Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.1□□□□□ -0.47
CopaQ8CIE6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Gm5616-201ENSMUST00000165252 384 ntBASIC12.09□□□□□ -0.47
CopaQ8CIE6 Gm8741-201ENSMUST00000174736 384 ntBASIC12.09□□□□□ -0.47
CopaQ8CIE6 Gm27627-201ENSMUST00000183644 150 ntBASIC12.09□□□□□ -0.47
CopaQ8CIE6 AU022133-201ENSMUST00000200601 873 ntBASIC12.09□□□□□ -0.47
CopaQ8CIE6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.09□□□□□ -0.47
CopaQ8CIE6 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopaQ8CIE6 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CopaQ8CIE6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CopaQ8CIE6 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CopaQ8CIE6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CopaQ8CIE6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
CopaQ8CIE6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CopaQ8CIE6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm23949-201ENSMUST00000104027 127 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm11989-201ENSMUST00000117240 672 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm11362-201ENSMUST00000118838 850 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm15711-201ENSMUST00000118889 535 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm11331-201ENSMUST00000119764 288 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm42997-202ENSMUST00000200321 985 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.08□□□□□ -0.48
CopaQ8CIE6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CopaQ8CIE6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CopaQ8CIE6 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms