Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc28bQ8CEG5 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm27023-201ENSMUST00000182372 285 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm29649-201ENSMUST00000185649 419 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm7561-201ENSMUST00000211203 886 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm6091-201ENSMUST00000098307 165 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Rgr-203ENSMUST00000225070 4704 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc28bQ8CEG5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm11591-201ENSMUST00000120063 702 ntBASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm14999-201ENSMUST00000121039 624 ntBASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm38241-201ENSMUST00000192641 898 ntBASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ccdc28bQ8CEG5 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms