Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps53Q8CCB4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Gm27438-201ENSMUST00000183480 110 ntBASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Ntng1-201ENSMUST00000051253 327 ntBASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps53Q8CCB4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Gm9555-201ENSMUST00000200908 583 ntBASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps53Q8CCB4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Vps53Q8CCB4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms