Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm16071-201ENSMUST00000119589 793 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm26047-201ENSMUST00000157308 113 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm10731-201ENSMUST00000181171 448 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Mir7076-201ENSMUST00000183519 74 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm17826-201ENSMUST00000189720 798 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm26047-202ENSMUST00000198840 115 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Pck2-205ENSMUST00000226352 2784 ntBASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sh3rf2Q8BZT2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm8459-201ENSMUST00000162504 760 ntBASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm45219-201ENSMUST00000205602 465 ntBASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sh3rf2Q8BZT2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms