Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm32999-201ENSMUST00000192693 562 ntBASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cpsf4Q8BQZ5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Gm19187-201ENSMUST00000206781 892 ntBASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cpsf4Q8BQZ5 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm11439-201ENSMUST00000118598 409 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm12036-201ENSMUST00000120008 530 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm16505-201ENSMUST00000179981 232 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm9230-201ENSMUST00000188228 532 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm37466-201ENSMUST00000195692 652 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cpsf4Q8BQZ5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms