Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sfr1Q8BP27 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm23949-201ENSMUST00000104027 127 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm11439-201ENSMUST00000118598 409 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm24990-201ENSMUST00000157406 323 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Mir7677-201ENSMUST00000184226 67 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm43184-201ENSMUST00000197247 542 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm5363-201ENSMUST00000211927 938 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sfr1Q8BP27 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sfr1Q8BP27 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sfr1Q8BP27 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sfr1Q8BP27 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sfr1Q8BP27 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm14028-201ENSMUST00000117434 479 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm14208-201ENSMUST00000119645 678 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm8343-201ENSMUST00000182705 994 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm7003-201ENSMUST00000195089 312 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm17931-201ENSMUST00000208132 634 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm4157-201ENSMUST00000211647 679 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sfr1Q8BP27 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms