Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.21■□□□□ 0.02
Col16a1Q8BLX7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col16a1Q8BLX7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Col16a1Q8BLX7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm15617-201ENSMUST00000118973 771 ntBASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm12129-201ENSMUST00000120104 1147 ntBASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm12461-201ENSMUST00000120231 1239 ntBASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm11942-201ENSMUST00000180255 345 ntBASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm29164-201ENSMUST00000185454 1024 ntBASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm44106-201ENSMUST00000203153 1599 ntBASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col16a1Q8BLX7 Gm8302-201ENSMUST00000119217 852 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm25569-201ENSMUST00000157175 131 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm44814-201ENSMUST00000207018 434 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm4903-201ENSMUST00000210462 405 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm42511-201ENSMUST00000196160 234 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm38344-201ENSMUST00000195306 1353 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Gm9915-201ENSMUST00000066196 1383 ntBASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Col16a1Q8BLX7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gm3828-201ENSMUST00000121817 257 ntBASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC15.18■□□□□ 0.02
Col16a1Q8BLX7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms