Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf38Q8BI21 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Gm13297-201ENSMUST00000120205 934 ntBASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Morn2-202ENSMUST00000227729 656 ntBASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf38Q8BI21 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Gm15370-201ENSMUST00000117158 253 ntBASIC11.4□□□□□ -0.58
Rnf38Q8BI21 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Gm8712-201ENSMUST00000221090 701 ntBASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rnf38Q8BI21 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rnf38Q8BI21 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms