Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trnp1Q80ZI1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm6630-201ENSMUST00000119199 454 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm26368-201ENSMUST00000157826 118 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm24328-201ENSMUST00000175104 67 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm21778-201ENSMUST00000178779 471 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm26976-201ENSMUST00000182929 908 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm43969-201ENSMUST00000204833 535 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trnp1Q80ZI1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Mir181d-201ENSMUST00000102383 72 ntBASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm14165-201ENSMUST00000121456 952 ntBASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm20495-201ENSMUST00000173902 235 ntBASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm26272-201ENSMUST00000179241 132 ntBASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm5599-201ENSMUST00000209602 788 ntBASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm8255-201ENSMUST00000218693 305 ntBASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trnp1Q80ZI1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trnp1Q80ZI1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trnp1Q80ZI1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trnp1Q80ZI1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trnp1Q80ZI1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms