Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nrde2Q80XC6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Nrde2Q80XC6 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nrde2Q80XC6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.13□□□□□ -0.47
Nrde2Q80XC6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nrde2Q80XC6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm8343-201ENSMUST00000182705 994 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm28686-201ENSMUST00000187404 609 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nrde2Q80XC6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Gm9463-201ENSMUST00000206707 601 ntBASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nrde2Q80XC6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nrde2Q80XC6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms