Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gm1848-201ENSMUST00000120711 789 ntBASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Mir6998-201ENSMUST00000183343 64 ntBASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Gm9645-201ENSMUST00000197131 792 ntBASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Gm43186-201ENSMUST00000198130 824 ntBASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pdzrn3Q69ZS0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pdzrn3Q69ZS0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm5419-201ENSMUST00000119301 527 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm12899-201ENSMUST00000120565 551 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm22442-201ENSMUST00000157256 144 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm6485-201ENSMUST00000160676 439 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Mir8115-201ENSMUST00000184992 119 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pdzrn3Q69ZS0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm8731-201ENSMUST00000118088 412 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm15004-201ENSMUST00000119192 630 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm16071-201ENSMUST00000119589 793 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm21092-201ENSMUST00000178995 955 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm17826-201ENSMUST00000189720 798 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pdzrn3Q69ZS0 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms