Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.94□□□□□ -0.18
Ctr9Q62018 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ctr9Q62018 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.93□□□□□ -0.18
Ctr9Q62018 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.93□□□□□ -0.18
Ctr9Q62018 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Ctr9Q62018 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Mir1943-201ENSMUST00000158276 73 ntBASIC13.93□□□□□ -0.18
Ctr9Q62018 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Mir6546-201ENSMUST00000184460 62 ntBASIC13.93□□□□□ -0.18
Ctr9Q62018 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Mir7686-201ENSMUST00000200604 57 ntBASIC13.93□□□□□ -0.18
Ctr9Q62018 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.93□□□□□ -0.18
Ctr9Q62018 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ctr9Q62018 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ctr9Q62018 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.92□□□□□ -0.18
Ctr9Q62018 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.92□□□□□ -0.18
Ctr9Q62018 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.92□□□□□ -0.18
Ctr9Q62018 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.92□□□□□ -0.18
Ctr9Q62018 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ctr9Q62018 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.92□□□□□ -0.18
Ctr9Q62018 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.91□□□□□ -0.18
Ctr9Q62018 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ctr9Q62018 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms