Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm12998-201ENSMUST00000122445 789 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm20482-202ENSMUST00000174729 825 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Mospd4-201ENSMUST00000180618 576 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Platr10-202ENSMUST00000191479 818 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm4857-201ENSMUST00000192718 785 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm21461-201ENSMUST00000200382 863 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm45865-201ENSMUST00000211815 945 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm45172-201ENSMUST00000206054 1301 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm29199-201ENSMUST00000187766 775 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Foxc1Q61572 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm37858-201ENSMUST00000192759 1231 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm38092-201ENSMUST00000195600 653 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm18290-201ENSMUST00000202900 844 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm43947-201ENSMUST00000203019 959 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 AC110816.1-201ENSMUST00000218559 980 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 AC132881.1-201ENSMUST00000223780 1062 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.04□□□□□ -0.96
Foxc1Q61572 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.04□□□□□ -0.96
Foxc1Q61572 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Foxc1Q61572 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms