Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox17Q61473 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox17Q61473 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.03□□□□□ -0.64
Sox17Q61473 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox17Q61473 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.02□□□□□ -0.64
Sox17Q61473 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox17Q61473 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sox17Q61473 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox17Q61473 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.02□□□□□ -0.64
Sox17Q61473 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox17Q61473 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.02□□□□□ -0.65
Sox17Q61473 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Gm27023-201ENSMUST00000182372 285 ntBASIC11.02□□□□□ -0.65
Sox17Q61473 Gm29649-201ENSMUST00000185649 419 ntBASIC11.02□□□□□ -0.65
Sox17Q61473 Gm37201-201ENSMUST00000191845 523 ntBASIC11.02□□□□□ -0.65
Sox17Q61473 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox17Q61473 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.02□□□□□ -0.65
Sox17Q61473 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.02□□□□□ -0.65
Sox17Q61473 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.02□□□□□ -0.65
Sox17Q61473 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox17Q61473 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox17Q61473 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox17Q61473 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sox17Q61473 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.01□□□□□ -0.65
Sox17Q61473 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Sox17Q61473 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Sox17Q61473 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Sox17Q61473 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Sox17Q61473 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox17Q61473 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox17Q61473 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Sox17Q61473 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.01□□□□□ -0.65
Sox17Q61473 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.01□□□□□ -0.65
Sox17Q61473 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox17Q61473 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.01□□□□□ -0.65
Sox17Q61473 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox17Q61473 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.01□□□□□ -0.65
Sox17Q61473 Gm18806-201ENSMUST00000207607 1775 ntBASIC11□□□□□ -0.65
Sox17Q61473 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox17Q61473 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms