Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.02□□□□□ -0.33
Ift88Q61371 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Ift88Q61371 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ift88Q61371 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ift88Q61371 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.02□□□□□ -0.33
Ift88Q61371 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.01□□□□□ -0.33
Ift88Q61371 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Gm15370-201ENSMUST00000117158 253 ntBASIC13.01□□□□□ -0.33
Ift88Q61371 Gm13297-201ENSMUST00000120205 934 ntBASIC13.01□□□□□ -0.33
Ift88Q61371 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.01□□□□□ -0.33
Ift88Q61371 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Lect2-202ENSMUST00000225183 823 ntBASIC13.01□□□□□ -0.33
Ift88Q61371 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ift88Q61371 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Ift88Q61371 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ift88Q61371 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ift88Q61371 Gm43931-201ENSMUST00000204817 2870 ntBASIC13□□□□□ -0.33
Ift88Q61371 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gm10152-201ENSMUST00000193475 1344 ntBASIC13□□□□□ -0.33
Ift88Q61371 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ift88Q61371 Gm15547-201ENSMUST00000122152 333 ntBASIC13□□□□□ -0.33
Ift88Q61371 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13□□□□□ -0.33
Ift88Q61371 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13□□□□□ -0.33
Ift88Q61371 Gm18187-201ENSMUST00000196476 984 ntBASIC13□□□□□ -0.33
Ift88Q61371 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gm4607-201ENSMUST00000206649 577 ntBASIC13□□□□□ -0.33
Ift88Q61371 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Gm30285-201ENSMUST00000214614 422 ntBASIC13□□□□□ -0.33
Ift88Q61371 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13□□□□□ -0.33
Ift88Q61371 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13□□□□□ -0.33
Ift88Q61371 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13□□□□□ -0.33
Ift88Q61371 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ift88Q61371 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ift88Q61371 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.99□□□□□ -0.33
Ift88Q61371 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ift88Q61371 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.99□□□□□ -0.33
Ift88Q61371 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ift88Q61371 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.99□□□□□ -0.33
Ift88Q61371 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Ift88Q61371 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ift88Q61371 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ift88Q61371 Gm37424-201ENSMUST00000191727 561 ntBASIC12.99□□□□□ -0.33
Ift88Q61371 Olfr284-202ENSMUST00000206647 966 ntBASIC12.99□□□□□ -0.33
Ift88Q61371 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ift88Q61371 Gm9823-201ENSMUST00000051212 327 ntBASIC12.99□□□□□ -0.33
Ift88Q61371 Gm10254-201ENSMUST00000052888 867 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms