Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.95□□□□□ -0.34
Col11a1Q61245 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm20493-201ENSMUST00000173706 213 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm23647-201ENSMUST00000175042 109 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Rn5s-201ENSMUST00000177555 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm22109-201ENSMUST00000177995 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm22291-201ENSMUST00000178027 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm23284-201ENSMUST00000178069 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm25018-201ENSMUST00000179081 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm25212-201ENSMUST00000179432 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm26391-201ENSMUST00000179843 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm27440-201ENSMUST00000184785 107 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12.95□□□□□ -0.34
Col11a1Q61245 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Col11a1Q61245 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm24089-201ENSMUST00000093696 109 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Gm6478-201ENSMUST00000099450 742 ntBASIC12.95□□□□□ -0.34
Col11a1Q61245 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col11a1Q61245 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.94□□□□□ -0.34
Col11a1Q61245 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.94□□□□□ -0.34
Col11a1Q61245 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.94□□□□□ -0.34
Col11a1Q61245 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Gm16165-201ENSMUST00000160140 795 ntBASIC12.94□□□□□ -0.34
Col11a1Q61245 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col11a1Q61245 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col11a1Q61245 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col11a1Q61245 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col11a1Q61245 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Gm37851-201ENSMUST00000193871 889 ntBASIC12.94□□□□□ -0.34
Col11a1Q61245 Gm18123-201ENSMUST00000210874 822 ntBASIC12.94□□□□□ -0.34
Col11a1Q61245 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col11a1Q61245 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col11a1Q61245 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col11a1Q61245 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col11a1Q61245 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms