Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.13□□□□□ -0.15
NfkbibQ60778 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm20495-201ENSMUST00000173902 235 ntBASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm8574-201ENSMUST00000203207 924 ntBASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NfkbibQ60778 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NfkbibQ60778 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NfkbibQ60778 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm14071-201ENSMUST00000117817 509 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm16166-201ENSMUST00000118291 787 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm24514-201ENSMUST00000174961 285 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.12□□□□□ -0.15
NfkbibQ60778 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.12□□□□□ -0.15
NfkbibQ60778 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm9132-201ENSMUST00000210182 832 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm10179-201ENSMUST00000086233 688 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NfkbibQ60778 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NfkbibQ60778 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.12□□□□□ -0.15
NfkbibQ60778 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NfkbibQ60778 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.11□□□□□ -0.15
NfkbibQ60778 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm15131-201ENSMUST00000119124 595 ntBASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm19459-201ENSMUST00000176240 835 ntBASIC14.11□□□□□ -0.15
NfkbibQ60778 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm7467-201ENSMUST00000185173 652 ntBASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.11□□□□□ -0.15
NfkbibQ60778 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NfkbibQ60778 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.11□□□□□ -0.15
NfkbibQ60778 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.11□□□□□ -0.15
NfkbibQ60778 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms