Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Gm7851-201ENSMUST00000117574 323 ntBASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Gm9062-201ENSMUST00000117712 727 ntBASIC11.15□□□□□ -0.62
Tnfaip3Q60769 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.15□□□□□ -0.62
Tnfaip3Q60769 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Spcs1-203ENSMUST00000226374 592 ntBASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Tnfaip3Q60769 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Tnfaip3Q60769 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm5733-201ENSMUST00000190232 939 ntBASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm6905-201ENSMUST00000205729 511 ntBASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfaip3Q60769 Map1b-203ENSMUST00000223725 2669 ntBASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfaip3Q60769 Gm11331-201ENSMUST00000119764 288 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms