Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
ClpbQ60649 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
ClpbQ60649 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Gm22133-201ENSMUST00000102082 109 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Gm4909-201ENSMUST00000118749 794 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Rprl1-201ENSMUST00000158050 327 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.35□□□□□ -0.59
ClpbQ60649 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Gm28071-201ENSMUST00000190355 478 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Gm9136-201ENSMUST00000193368 454 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
ClpbQ60649 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.35□□□□□ -0.59
ClpbQ60649 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
ClpbQ60649 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.35□□□□□ -0.59
ClpbQ60649 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
ClpbQ60649 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
ClpbQ60649 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.34□□□□□ -0.59
ClpbQ60649 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
ClpbQ60649 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Gm12217-201ENSMUST00000118858 696 ntBASIC11.34□□□□□ -0.59
ClpbQ60649 Gm12266-201ENSMUST00000120311 962 ntBASIC11.34□□□□□ -0.59
ClpbQ60649 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
ClpbQ60649 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.34□□□□□ -0.59
ClpbQ60649 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.34□□□□□ -0.59
ClpbQ60649 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.34□□□□□ -0.59
ClpbQ60649 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.34□□□□□ -0.59
ClpbQ60649 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
ClpbQ60649 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.34□□□□□ -0.59
ClpbQ60649 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
ClpbQ60649 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.34□□□□□ -0.59
ClpbQ60649 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
ClpbQ60649 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms